R-L21 Files
Phylogenetic Trees by Alex Williamson
These trees were generated using the neighbor-joining algorithm provided by the PHYLIP phylogeny package. This algorithm requires a distance matrix, for which the data came from various versions of Mike Walsh’s Excel spreadsheet (see below). Only members with at least the 67 FTDNA markers were used.
- R-L21 Tree generated from 20100221 data, .pdf [54kB]
- R-L21 Tree generated from 20100402 data, .pdf [71kB]
- R-L21 Tree generated from 20100927 data, .pdf [168kB]
- R-L21 Tree generated from 20110110 data, .pdf [263kB]
- R-L21 Tree generated from 20110211 data, .pdf [280kB]
- R-L21 Tree generated from 20110531 data, .pdf [344kB]
- R-L21 Tree generated from 20110619 data, .pdf [450kB]
- R-L513 Tree generated from 20110531 data, .pdf [28kB]
These trees were generated using a custom designed SNP constrained neighbor-joining algorithm. It uses STR data from Mike Walsh's excel spreadsheets as well
as SNP data from various FTDNA project websites.
- R-L21 Tree generated from 20120727 data, .pdf [514kB] - 67 Markers
- R-L21 Tree generated from 20120803 data, .pdf [246kB] - 111 Markers
- R-L21 Tree generated from 20120824 data, .pdf [257kB] - 111 Markers
- R-L21 Tree generated from 20120830 data, .pdf [537kB] - 67 Markers
- R-L21 Tree generated from 20121109 data, .pdf [287kB] - 111 Markers
- R-L21 Tree generated from 20121224 data, .pdf [642kB] - 67 Markers
- R-L21 Tree generated from 20130428 data, .pdf [351kB] - 111 Markers
- R-M343 (R1b) Tree generated from 20131123 data, .pdf [1008kB] - 111 Markers
Sorted Excel databases of L21+ tested haplotypes by Mike Walsh
This is an Excel database of men who have tested positive for the SNP L21. It includes their haplotypes, as well as information regarding possible clustering. Unlike the similar Excel files available from the Yahoo R-L21 Project page, the entries in these files have been sorted to be in the same order as the corresponding tree above. This makes it useful for identifying the pattern of mutations in each cluster.
- Sorted Excel database from 20100221, .xls [3,309kB]
- Sorted Excel database from 20100402 (67 markers only), .xls [2,420kB]
- Sorted Excel database from 20100927, .xls [1,427kB] (zipped)
- Sorted Excel database from 20110110, .xls [1,599kB] (zipped)
- Sorted Excel database from 20110211, .xls [1,783kB] (zipped)
- Sorted Excel database from 20110531, .xlsm [4,666kB] (Excel 2007 format)
- Sorted Excel database from 20110619, .xlsm [5,803kB] (Excel 2007 format)
Cluster Modals
Below are Excel files with the modal haplotypes of various R-L21 clusters, as infered from the trees generated above.
- R-L21 Cluster Modals from 20100927, .xls [41kB]
- R-L21 Cluster Modals from 20110110, .xls [68kB]
- R-L21 Cluster Modals from 20110531, .xls [90kB]
- R-L21 Cluster Modals from 20110619, .xls [101kB]
- R-L21 Cluster Modals from 20120727, .xls [54kB]
- R-L21 Cluster Modals from 20120803, .xls [52kB]
- R-L21 Cluster Modals from 20120824, .xls [51kB]
- R-L21 Cluster Modals from 20120830, .xls [37kB]
- R-L21 Cluster Modals from 20120830, .xls [51kB]
Below are Excel files with the modal haplotypes of various R-M343 clades, as infered from the trees generated above.
- R-M343 (R1b) Subclade Modals from 20131208, .csv [62kB]